STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP13159.1Response regulator receiver domain-containing protein. (132 aa)    
Predicted Functional Partners:
SDP13083.1
His Kinase A (phospho-acceptor) domain-containing protein.
 0.976
SDP13129.1
Transcriptional regulatory protein, C terminal.
     0.951
SDO79104.1
PAS domain S-box-containing protein.
 0.942
SDP50338.1
Signal transduction histidine kinase.
 0.941
SDO80915.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 0.934
SDP78626.1
Tetratricopeptide repeat-containing protein.
 
 0.928
SDP64702.1
HAMP domain-containing protein.
 0.914
SDP12244.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 0.910
SDP63876.1
Signal transduction histidine kinase.
 0.910
SDP71274.1
Two-component system, OmpR family, sensor histidine kinase VanS.
 
  0.900
Your Current Organism:
Clostridium gasigenes
NCBI taxonomy Id: 94869
Other names: ATCC BAA-158, C. gasigenes, CIP 106517, Clostridium gasigenes Broda et al. 2000, DSM 12272, strain DB1A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.