Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDO79763.1 | mltG | SAMN04488529_101458 | SAMN04488529_103153 | Soluble lytic murein transglycosylase. | UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.662 |
| SDO82011.1 | SDO93939.1 | SAMN04488529_101520 | SAMN04488529_101881 | Penicillin-binding protein 1A. | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | 0.771 |
| SDO82011.1 | SDP27778.1 | SAMN04488529_101520 | SAMN04488529_103149 | Penicillin-binding protein 1A. | Cell division protein FtsI/penicillin-binding protein 2. | 0.665 |
| SDO82011.1 | ftsZ | SAMN04488529_101520 | SAMN04488529_103146 | Penicillin-binding protein 1A. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.610 |
| SDO82011.1 | mltG | SAMN04488529_101520 | SAMN04488529_103153 | Penicillin-binding protein 1A. | UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.580 |
| SDO93939.1 | SDO82011.1 | SAMN04488529_101881 | SAMN04488529_101520 | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | Penicillin-binding protein 1A. | 0.771 |
| SDO93939.1 | SDP27778.1 | SAMN04488529_101881 | SAMN04488529_103149 | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | Cell division protein FtsI/penicillin-binding protein 2. | 0.468 |
| SDO93939.1 | ftsZ | SAMN04488529_101881 | SAMN04488529_103146 | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.482 |
| SDO93939.1 | mltG | SAMN04488529_101881 | SAMN04488529_103153 | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.547 |
| SDP27778.1 | SDO82011.1 | SAMN04488529_103149 | SAMN04488529_101520 | Cell division protein FtsI/penicillin-binding protein 2. | Penicillin-binding protein 1A. | 0.665 |
| SDP27778.1 | SDO93939.1 | SAMN04488529_103149 | SAMN04488529_101881 | Cell division protein FtsI/penicillin-binding protein 2. | Stage V sporulation protein D (sporulation-specific penicillin-binding protein). | 0.468 |
| SDP27778.1 | SDP27830.1 | SAMN04488529_103149 | SAMN04488529_103151 | Cell division protein FtsI/penicillin-binding protein 2. | Putative protease. | 0.620 |
| SDP27778.1 | SDP27856.1 | SAMN04488529_103149 | SAMN04488529_103152 | Cell division protein FtsI/penicillin-binding protein 2. | Predicted O-methyltransferase YrrM. | 0.694 |
| SDP27778.1 | SDP27906.1 | SAMN04488529_103149 | SAMN04488529_103154 | Cell division protein FtsI/penicillin-binding protein 2. | GTP-binding protein. | 0.583 |
| SDP27778.1 | mltG | SAMN04488529_103149 | SAMN04488529_103153 | Cell division protein FtsI/penicillin-binding protein 2. | UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.703 |
| SDP27778.1 | udk | SAMN04488529_103149 | SAMN04488529_103150 | Cell division protein FtsI/penicillin-binding protein 2. | Uridine kinase. | 0.723 |
| SDP27830.1 | SDP27778.1 | SAMN04488529_103151 | SAMN04488529_103149 | Putative protease. | Cell division protein FtsI/penicillin-binding protein 2. | 0.620 |
| SDP27830.1 | SDP27856.1 | SAMN04488529_103151 | SAMN04488529_103152 | Putative protease. | Predicted O-methyltransferase YrrM. | 0.929 |
| SDP27830.1 | SDP27906.1 | SAMN04488529_103151 | SAMN04488529_103154 | Putative protease. | GTP-binding protein. | 0.633 |
| SDP27830.1 | mltG | SAMN04488529_103151 | SAMN04488529_103153 | Putative protease. | UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.790 |
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