STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP24654.1ABC-type lipoprotein export system, ATPase component. (695 aa)    
Predicted Functional Partners:
SDP61980.1
ABC-type lipoprotein export system, ATPase component.
 
0.996
SDP24626.1
ABC-type lipoprotein export system, ATPase component.
 
0.993
SDP11656.1
Multidrug efflux pump subunit AcrA (membrane-fusion protein).
  
 
 0.971
SDP50511.1
Multidrug resistance efflux pump.
  
 
 0.895
SDO93710.1
Putative ABC transport system permease protein.
 
 0.867
SDP11607.1
Putative ABC transport system permease protein.
 
0.866
SDP68256.1
Lipoprotein-releasing system permease protein.
 
 0.838
SDO71127.1
Putative ABC transport system permease protein.
  
 0.801
SDO66746.1
Putative ABC transport system permease protein.
  
 0.801
SDP14609.1
Putative ABC transport system permease protein.
  
 0.801
Your Current Organism:
Clostridium gasigenes
NCBI taxonomy Id: 94869
Other names: ATCC BAA-158, C. gasigenes, CIP 106517, Clostridium gasigenes Broda et al. 2000, DSM 12272, strain DB1A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.