STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP61806.1PTS system lichenan oligosaccharide-specific IIC component, Lac family; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. (445 aa)    
Predicted Functional Partners:
SDP81463.1
PTS system, cellobiose-specific IIA component.
 
 
 0.980
SDP11790.1
PTS system, cellobiose-specific IIA component.
 
 
 0.978
SDP11845.1
PTS system, cellobiose-specific IIB component.
 
 
 0.954
SDP81451.1
PTS system, cellobiose-specific IIB component.
 
 
 0.954
SDP11870.1
6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
 
 
 0.898
SDP48134.1
6-phospho-beta-glucosidase.
 
 
 0.897
SDP10301.1
Aryl-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
 
 0.854
SDP11759.1
Aryl-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
 
 0.839
SDP68394.1
Maltose-6-phosphate glucosidase.
 
 
 0.769
SDP24884.1
Phosphocarrier protein.
    
  0.763
Your Current Organism:
Clostridium gasigenes
NCBI taxonomy Id: 94869
Other names: ATCC BAA-158, C. gasigenes, CIP 106517, Clostridium gasigenes Broda et al. 2000, DSM 12272, strain DB1A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.