Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDO67457.1 | SDO73830.1 | SAMN04488529_10192 | SAMN04488529_101270 | PucR C-terminal helix-turn-helix domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.758 |
SDO67457.1 | SDP66480.1 | SAMN04488529_10192 | SAMN04488529_11139 | PucR C-terminal helix-turn-helix domain-containing protein. | Transcriptional regulator, CdaR family. | 0.681 |
SDO73830.1 | SDO67457.1 | SAMN04488529_101270 | SAMN04488529_10192 | Diguanylate cyclase (GGDEF) domain-containing protein. | PucR C-terminal helix-turn-helix domain-containing protein. | 0.758 |
SDO73830.1 | SDP54892.1 | SAMN04488529_101270 | SAMN04488529_107119 | Diguanylate cyclase (GGDEF) domain-containing protein. | PucR C-terminal helix-turn-helix domain-containing protein. | 0.758 |
SDO73830.1 | SDP66463.1 | SAMN04488529_101270 | SAMN04488529_11138 | Diguanylate cyclase (GGDEF) domain-containing protein. | Protein of unknown function. | 0.743 |
SDO73830.1 | SDP66480.1 | SAMN04488529_101270 | SAMN04488529_11139 | Diguanylate cyclase (GGDEF) domain-containing protein. | Transcriptional regulator, CdaR family. | 0.758 |
SDO88615.1 | SDP12892.1 | SAMN04488529_101722 | SAMN04488529_102231 | Hypothetical protein. | MFS transporter, OPA family, hexose phosphate transport protein UhpT. | 0.627 |
SDO88615.1 | SDP66480.1 | SAMN04488529_101722 | SAMN04488529_11139 | Hypothetical protein. | Transcriptional regulator, CdaR family. | 0.469 |
SDP12892.1 | SDO88615.1 | SAMN04488529_102231 | SAMN04488529_101722 | MFS transporter, OPA family, hexose phosphate transport protein UhpT. | Hypothetical protein. | 0.627 |
SDP12892.1 | SDP66480.1 | SAMN04488529_102231 | SAMN04488529_11139 | MFS transporter, OPA family, hexose phosphate transport protein UhpT. | Transcriptional regulator, CdaR family. | 0.415 |
SDP54892.1 | SDO73830.1 | SAMN04488529_107119 | SAMN04488529_101270 | PucR C-terminal helix-turn-helix domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.758 |
SDP54892.1 | SDP66480.1 | SAMN04488529_107119 | SAMN04488529_11139 | PucR C-terminal helix-turn-helix domain-containing protein. | Transcriptional regulator, CdaR family. | 0.459 |
SDP66463.1 | SDO73830.1 | SAMN04488529_11138 | SAMN04488529_101270 | Protein of unknown function. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.743 |
SDP66463.1 | SDP66480.1 | SAMN04488529_11138 | SAMN04488529_11139 | Protein of unknown function. | Transcriptional regulator, CdaR family. | 0.419 |
SDP66480.1 | SDO67457.1 | SAMN04488529_11139 | SAMN04488529_10192 | Transcriptional regulator, CdaR family. | PucR C-terminal helix-turn-helix domain-containing protein. | 0.681 |
SDP66480.1 | SDO73830.1 | SAMN04488529_11139 | SAMN04488529_101270 | Transcriptional regulator, CdaR family. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.758 |
SDP66480.1 | SDO88615.1 | SAMN04488529_11139 | SAMN04488529_101722 | Transcriptional regulator, CdaR family. | Hypothetical protein. | 0.469 |
SDP66480.1 | SDP12892.1 | SAMN04488529_11139 | SAMN04488529_102231 | Transcriptional regulator, CdaR family. | MFS transporter, OPA family, hexose phosphate transport protein UhpT. | 0.415 |
SDP66480.1 | SDP54892.1 | SAMN04488529_11139 | SAMN04488529_107119 | Transcriptional regulator, CdaR family. | PucR C-terminal helix-turn-helix domain-containing protein. | 0.459 |
SDP66480.1 | SDP66463.1 | SAMN04488529_11139 | SAMN04488529_11138 | Transcriptional regulator, CdaR family. | Protein of unknown function. | 0.419 |
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