STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ64177.1Alpha-galactosidase. (731 aa)    
Predicted Functional Partners:
SIR42007.1
Beta-galactosidase.
 
  
 0.800
SIQ64154.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
    0.792
SIQ28859.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
 
  
  0.778
SIQ64124.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
    0.774
SIQ38290.1
Beta-galactosidase.
 
  
 0.768
SIQ62166.1
Aldose 1-epimerase.
    
  0.744
SIR37228.1
Aldose 1-epimerase.
    
  0.744
SIR62598.1
Alpha-galactosidase.
    
  0.742
SIR38857.1
Beta-galactosidase/evolved beta-galactosidase subunit alpha.
 
  
 0.741
galT
UTP-hexose-1-phosphate uridylyltransferase.
 
  
 0.686
Your Current Organism:
Paenibacillus macquariensis
NCBI taxonomy Id: 948756
Other names: ATCC 23464, Bacillus macquariensis, Bacillus sp. NCIM2474, CCUG 37394, CIP 103269, DSM 2, LMG 13289, LMG 6935, LMG:13289, LMG:6935, NCIB 9934, NCIB:9934, NCTC 10419, NRRL B-14306, NRRL:B:14306, P. macquariensis
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