Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIR19930.1 | SIR19943.1 | SAMN05421578_108187 | SAMN05421578_108188 | DMSO/TMAO reductase YedYZ, molybdopterin-dependent catalytic subunit. | Uridine phosphorylase. | 0.803 |
SIR19930.1 | SIR19962.1 | SAMN05421578_108187 | SAMN05421578_108189 | DMSO/TMAO reductase YedYZ, molybdopterin-dependent catalytic subunit. | Predicted transcriptional regulator YheO, contains PAS and DNA-binding HTH domains. | 0.416 |
SIR19943.1 | SIR19930.1 | SAMN05421578_108188 | SAMN05421578_108187 | Uridine phosphorylase. | DMSO/TMAO reductase YedYZ, molybdopterin-dependent catalytic subunit. | 0.803 |
SIR19943.1 | SIR19962.1 | SAMN05421578_108188 | SAMN05421578_108189 | Uridine phosphorylase. | Predicted transcriptional regulator YheO, contains PAS and DNA-binding HTH domains. | 0.416 |
SIR19962.1 | SIR19930.1 | SAMN05421578_108189 | SAMN05421578_108187 | Predicted transcriptional regulator YheO, contains PAS and DNA-binding HTH domains. | DMSO/TMAO reductase YedYZ, molybdopterin-dependent catalytic subunit. | 0.416 |
SIR19962.1 | SIR19943.1 | SAMN05421578_108189 | SAMN05421578_108188 | Predicted transcriptional regulator YheO, contains PAS and DNA-binding HTH domains. | Uridine phosphorylase. | 0.416 |
SIR19962.1 | SIR19974.1 | SAMN05421578_108189 | SAMN05421578_108190 | Predicted transcriptional regulator YheO, contains PAS and DNA-binding HTH domains. | Cystathione beta-lyase. | 0.773 |
SIR19962.1 | SIR19988.1 | SAMN05421578_108189 | SAMN05421578_108191 | Predicted transcriptional regulator YheO, contains PAS and DNA-binding HTH domains. | Transporter, NhaC family. | 0.702 |
SIR19962.1 | SIR20000.1 | SAMN05421578_108189 | SAMN05421578_108192 | Predicted transcriptional regulator YheO, contains PAS and DNA-binding HTH domains. | Endoribonuclease L-PSP. | 0.675 |
SIR19974.1 | SIR19962.1 | SAMN05421578_108190 | SAMN05421578_108189 | Cystathione beta-lyase. | Predicted transcriptional regulator YheO, contains PAS and DNA-binding HTH domains. | 0.773 |
SIR19974.1 | SIR19988.1 | SAMN05421578_108190 | SAMN05421578_108191 | Cystathione beta-lyase. | Transporter, NhaC family. | 0.667 |
SIR19974.1 | SIR20000.1 | SAMN05421578_108190 | SAMN05421578_108192 | Cystathione beta-lyase. | Endoribonuclease L-PSP. | 0.573 |
SIR19988.1 | SIR19962.1 | SAMN05421578_108191 | SAMN05421578_108189 | Transporter, NhaC family. | Predicted transcriptional regulator YheO, contains PAS and DNA-binding HTH domains. | 0.702 |
SIR19988.1 | SIR19974.1 | SAMN05421578_108191 | SAMN05421578_108190 | Transporter, NhaC family. | Cystathione beta-lyase. | 0.667 |
SIR19988.1 | SIR20000.1 | SAMN05421578_108191 | SAMN05421578_108192 | Transporter, NhaC family. | Endoribonuclease L-PSP. | 0.681 |
SIR20000.1 | SIR19962.1 | SAMN05421578_108192 | SAMN05421578_108189 | Endoribonuclease L-PSP. | Predicted transcriptional regulator YheO, contains PAS and DNA-binding HTH domains. | 0.675 |
SIR20000.1 | SIR19974.1 | SAMN05421578_108192 | SAMN05421578_108190 | Endoribonuclease L-PSP. | Cystathione beta-lyase. | 0.573 |
SIR20000.1 | SIR19988.1 | SAMN05421578_108192 | SAMN05421578_108191 | Endoribonuclease L-PSP. | Transporter, NhaC family. | 0.681 |