STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIM55Tripartite motif containing 55. (544 aa)    
Predicted Functional Partners:
TRIM63
Tripartite motif containing 63.
   
  0.957
TRIM54
Tripartite motif containing 54.
   
 
 0.940
TTN
Uncharacterized protein.
   
 0.893
UBE2D3
Ubiquitin conjugating enzyme E2 D3; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.824
TRIM13
Tripartite motif containing 13.
   
 
 0.816
SPEGNB
SPEG neighbor.
   
 0.796
SQSTM1
Sequestosome 1.
    
 0.783
ENSCCAP00000001208
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.713
ENSCCAP00000020958
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
  0.713
TRIM23
Tripartite motif containing 23.
    
 0.708
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.