LOC108297250 protein (Cebus capucinus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

LOC108297250

Uncharacterized protein. (502 aa)

Predicted Functional Partners:

LOC108297250-2

0.816

ENSCCAP00000038137

0.627

LOC108297248

0.627

CD209

0.606

XDH

0.595

DDX41

0.589

LOC108283660

0.573

RHAG

0.544

ICOS

0.489

PPL

0.479

Your Current Organism:

Cebus capucinus

NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CD209	LOC108283660	ENSCCAP00000004635	ENSCCAP00000005033	CD209 molecule.	C-type lectin domain-containing protein.	0.770
CD209	LOC108297250	ENSCCAP00000004635	ENSCCAP00000001022	CD209 molecule.	Uncharacterized protein.	0.606
CD209	LOC108297250-2	ENSCCAP00000004635	ENSCCAP00000006304	CD209 molecule.	Uncharacterized protein.	0.575
DDX41	ENSCCAP00000038137	ENSCCAP00000036735	ENSCCAP00000038137	DEAD-box helicase 41.	Uncharacterized protein.	0.456
DDX41	LOC108297248	ENSCCAP00000036735	ENSCCAP00000039170	DEAD-box helicase 41.	Uncharacterized protein.	0.456
DDX41	LOC108297250	ENSCCAP00000036735	ENSCCAP00000001022	DEAD-box helicase 41.	Uncharacterized protein.	0.589
DDX41	LOC108297250-2	ENSCCAP00000036735	ENSCCAP00000006304	DEAD-box helicase 41.	Uncharacterized protein.	0.509
ENSCCAP00000038137	DDX41	ENSCCAP00000038137	ENSCCAP00000036735	Uncharacterized protein.	DEAD-box helicase 41.	0.456
ENSCCAP00000038137	ICOS	ENSCCAP00000038137	ENSCCAP00000003956	Uncharacterized protein.	Inducible T cell costimulator.	0.489
ENSCCAP00000038137	LOC108297250	ENSCCAP00000038137	ENSCCAP00000001022	Uncharacterized protein.	Uncharacterized protein.	0.627
ENSCCAP00000038137	LOC108297250-2	ENSCCAP00000038137	ENSCCAP00000006304	Uncharacterized protein.	Uncharacterized protein.	0.636
ENSCCAP00000038137	PPL	ENSCCAP00000038137	ENSCCAP00000030007	Uncharacterized protein.	Periplakin.	0.467
ICOS	ENSCCAP00000038137	ENSCCAP00000003956	ENSCCAP00000038137	Inducible T cell costimulator.	Uncharacterized protein.	0.489
ICOS	LOC108297248	ENSCCAP00000003956	ENSCCAP00000039170	Inducible T cell costimulator.	Uncharacterized protein.	0.489
ICOS	LOC108297250	ENSCCAP00000003956	ENSCCAP00000001022	Inducible T cell costimulator.	Uncharacterized protein.	0.489
ICOS	LOC108297250-2	ENSCCAP00000003956	ENSCCAP00000006304	Inducible T cell costimulator.	Uncharacterized protein.	0.489
LOC108283660	CD209	ENSCCAP00000005033	ENSCCAP00000004635	C-type lectin domain-containing protein.	CD209 molecule.	0.770
LOC108283660	LOC108297250	ENSCCAP00000005033	ENSCCAP00000001022	C-type lectin domain-containing protein.	Uncharacterized protein.	0.573
LOC108283660	LOC108297250-2	ENSCCAP00000005033	ENSCCAP00000006304	C-type lectin domain-containing protein.	Uncharacterized protein.	0.573
LOC108297248	DDX41	ENSCCAP00000039170	ENSCCAP00000036735	Uncharacterized protein.	DEAD-box helicase 41.	0.456