STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMPD4Sphingomyelin phosphodiesterase 4. (866 aa)    
Predicted Functional Partners:
SMPD3
Sphingomyelin phosphodiesterase 3.
     
 0.963
SMPD2
Sphingomyelin phosphodiesterase 2.
     
 0.953
SMPD1
Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide.
     
 0.923
DEGS1
Delta 4-desaturase, sphingolipid 1.
     
 0.907
CERS2
Ceramide synthase 2.
     
 0.901
SGMS1
Sphingomyelin synthase 1.
     
 0.899
CERK
Ceramide kinase.
     
 0.899
UGCG
UDP-glucose ceramide glucosyltransferase.
     
 0.899
ASAH2
Neutral ceramidase.
     
 0.898
SGMS2
Sphingomyelin synthase 2.
     
 0.898
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.