Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARL8AADP ribosylation factor like GTPase 8A; Belongs to the small GTPase superfamily. Arf family. (186 aa)    
Predicted Functional Partners:
PLEKHM1
RUN domain-containing protein.
    
 
 0.859
ARL8B
ADP ribosylation factor like GTPase 8B; Belongs to the small GTPase superfamily. Arf family.
     
  0.801
RAB7A
RAB7A, member RAS oncogene family.
   
 0.784
PLEKHM2
Pleckstrin homology and RUN domain containing M2.
   
 
 0.782
RAB2A
RAB2A, member RAS oncogene family.
   
 
 0.716
TMEM192
Transmembrane protein 192.
    
 0.624
RUBCN
Rubicon autophagy regulator.
    
 0.617
VPS41
VPS41 subunit of HOPS complex.
    
 
 0.608
ITSN2
Intersectin 2.
    
 0.587
LAMTOR1
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
   
 0.576
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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