STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTAR1Protein prenyltransferase alpha subunit repeat containing 1. (429 aa)    
Predicted Functional Partners:
ENSCCAP00000033742
Uncharacterized protein.
    
 0.976
CHM
Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.
   
 0.957
YKT6
YKT6 v-SNARE homolog; Belongs to the synaptobrevin family.
    
 
 0.882
FBXL2
F-box and leucine rich repeat protein 2.
    
 
 0.847
RAB26
RAB26, member RAS oncogene family.
    
 0.675
LSM7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
  
 0.670
RAB9B
RAB9B, member RAS oncogene family.
    
 0.668
RAB9A
RAB9A, member RAS oncogene family.
    
 0.668
ENSCCAP00000001605
Uncharacterized protein; Belongs to the SKP1 family.
    
 
 0.665
SKP1
S-phase kinase associated protein 1; Belongs to the SKP1 family.
    
 
 0.665
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.