Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTAR1Protein prenyltransferase alpha subunit repeat containing 1. (429 aa)    
Predicted Functional Partners:
ENSCCAP00000033742
Uncharacterized protein.
    
 0.986
YKT6
YKT6 v-SNARE homolog; Belongs to the synaptobrevin family.
   
 
 0.925
CHM
Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.
   
 0.876
RAB26
RAB26, member RAS oncogene family.
    
 0.865
FBXL2
F-box and leucine rich repeat protein 2.
    
 
 0.822
PGGT1B
Protein geranylgeranyltransferase type I subunit beta.
    
 0.760
RAB7B
RAB7B, member RAS oncogene family.
    
 0.711
FBXL20
F-box and leucine rich repeat protein 20.
    
 
 0.704
RAB9B
RAB9B, member RAS oncogene family.
    
 0.700
RAB9A
RAB9A, member RAS oncogene family.
    
 0.700
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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