STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCAP00000001276Uncharacterized protein. (64 aa)    
Predicted Functional Partners:
SNRPG
Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing.
   
  
 0.834
COX7C
Cytochrome c oxidase subunit 7C.
   
    0.781
LOC108304920
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 
 0.743
RPL38
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 
 0.743
LOC108283972
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 
 0.743
ATP5F1E
ATP synthase F1 subunit epsilon.
   
    0.738
UBL5
Ubiquitin like 5.
   
    0.729
ENSCCAP00000014626
Uncharacterized protein.
   
    0.729
COX6C
Cytochrome c oxidase subunit 6C.
   
    0.720
SERF2
Small EDRK-rich factor 2.
   
    0.713
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.