STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCAP00000001276Uncharacterized protein. (64 aa)    
Predicted Functional Partners:
NEDD8
Ubiquitin-like domain-containing protein.
   
    0.658
POMP
Proteasome maturation protein.
   
    0.658
SNRPG
Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing.
   
    0.658
ENSCCAP00000034931
Ubiquitin-like domain-containing protein.
   
    0.658
UBL5
Ubiquitin like 5.
   
    0.598
ENSCCAP00000014626
Uncharacterized protein.
   
    0.598
COX7C
Cytochrome c oxidase subunit 7C.
   
    0.539
ENSCCAP00000003033
Uncharacterized protein.
   
    0.510
SERF2
Small EDRK-rich factor 2.
   
    0.456
COX7A2
Cytochrome c oxidase subunit 7A2.
   
    0.414
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.