STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA16Spermatogenesis associated 16. (570 aa)    
Predicted Functional Partners:
LOC108313010
Uncharacterized protein.
      
 0.734
TMCO5A
Transmembrane and coiled-coil domains 5A.
      
 0.726
C9orf43
Chromosome 9 open reading frame 43.
      
 0.726
MAGEB16
MAGE family member B16.
   
  
 0.726
C12orf40
Chromosome 12 open reading frame 40.
      
 0.726
SLC9B1
Solute carrier family 9 member B1.
      
 0.725
FAM71D
Family with sequence similarity 71 member D.
      
 0.725
PLCZ1
Phosphoinositide phospholipase C.
   
  
 0.695
ZFAND4
Zinc finger AN1-type containing 4.
      
 0.681
DPY19L2
Dpy-19 like 2.
      
 0.676
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.