Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HTRA4HtrA serine peptidase 4. (448 aa)    
Predicted Functional Partners:
XIAP
X-linked inhibitor of apoptosis.
    
 0.875
GCM1
Glial cells missing transcription factor 1.
    
 
 0.842
PINK1
PTEN induced kinase 1.
    
 0.825
DIABLO
Uncharacterized protein.
    
 0.771
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
  0.767
BIRC3
Baculoviral IAP repeat containing 3.
    
 0.754
BIRC2
Baculoviral IAP repeat containing 2.
    
 0.754
BIRC7
Baculoviral IAP repeat containing 7.
    
 0.754
MAPT
Microtubule-associated protein.
    
   0.735
CFH
Uncharacterized protein.
     
 0.732
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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