Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BARHL1BarH like homeobox 1. (327 aa)    
Predicted Functional Partners:
ATOH1
Atonal bHLH transcription factor 1.
   
 
 0.575
IRX3
Iroquois homeobox 3.
   
 
 0.515
LHX5
LIM homeobox 5.
   
 
 0.513
LHX1
LIM homeobox 1.
   
 
 0.502
ASTN1
Astrotactin 1.
    
 0.500
LHX9
LIM homeobox 9.
   
 
 0.484
PTF1A
Pancreas associated transcription factor 1a.
      
 0.447
TBR1
T-box brain transcription factor 1.
  
 
 0.442
HOMEZ
Homeobox and leucine zipper encoding.
    
 
 0.418
GRXCR2
Glutaredoxin and cysteine rich domain containing 2.
      
 0.417
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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