STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC108294029SSD domain-containing protein. (350 aa)    
Predicted Functional Partners:
UTP18
UTP18 small subunit processome component.
      
 0.614
DDA1
DET1 and DDB1 associated 1.
      
 0.559
CNNM1
Cyclin and CBS domain divalent metal cation transport mediator 1.
      
 0.558
HIVEP1
Human immunodeficiency virus type I enhancer binding protein 1.
      
 0.555
DISP3
Dispatched RND transporter family member 3.
   
  
 0.516
VCPIP1
Valosin containing protein interacting protein 1.
      
 0.510
TMEM178A
Transmembrane protein 178A.
      
 0.502
PXMP4
Peroxisomal membrane protein 4; Belongs to the peroxisomal membrane protein PXMP2/4 family.
      
 0.500
GRID2IP
Grid2 interacting protein.
    
 
 0.454
ENC1
Ectodermal-neural cortex 1.
      
 0.444
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.