Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LRRN1Leucine rich repeat neuronal 1. (716 aa)    
Predicted Functional Partners:
AP5M1
Adaptor related protein complex 5 subunit mu 1; Belongs to the adaptor complexes medium subunit family.
    
  0.659
AP2S1
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
  0.639
AP5B1
Adaptor related protein complex 5 subunit beta 1.
    
  0.638
SLC18A3
Solute carrier family 18 member A3.
     
  0.628
AP5S1
Adaptor related protein complex 5 subunit sigma 1.
     
  0.628
ITGA6
Integrin subunit alpha 6; Belongs to the integrin alpha chain family.
    
 0.562
LIMA1
LIM domain and actin binding 1.
      
 0.520
FGF13
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
     
 0.510
GAL3ST4
Galactose-3-O-sulfotransferase 4.
      
 0.506
SYT14
Synaptotagmin 14.
      
 0.503
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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