STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM36Tripartite motif containing 36. (729 aa)    
Predicted Functional Partners:
CUL9
Cullin 9; Belongs to the cullin family.
    
 0.536
TRIM39
Tripartite motif containing 39.
   
  
 0.530
HERC2
HECT and RLD domain containing E3 ubiquitin protein ligase 2.
      
 0.523
ENSCCAP00000014200
Uncharacterized protein.
    
 0.515
RCOR1
REST corepressor 1.
    
 
 0.468
TMLHE
Trimethyllysine hydroxylase, epsilon.
      
 0.447
TRAT1
T cell receptor associated transmembrane adaptor 1.
      
 0.440
CUL7
Cullin 7; Belongs to the cullin family.
   
 
 0.429
WFDC3
Uncharacterized protein.
      
 0.403
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.