Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HERPUD2HERPUD family member 2. (416 aa)    
Predicted Functional Partners:
FAM8A1
Family with sequence similarity 8 member A1.
    
 0.885
AMFR
Autocrine motility factor receptor.
   
 0.863
SYVN1
Synoviolin 1.
   
 0.863
SEL1L
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
    
 0.850
UBE2J1
Ubiquitin conjugating enzyme E2 J1.
   
 
 0.830
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
    
 0.779
PLAA
Phospholipase A2 activating protein.
     
  0.713
SEL1L2
SEL1L2 adaptor subunit of ERAD E3 ligase.
    
 0.683
ERLEC1
Endoplasmic reticulum lectin 1.
     
 0.667
OS9
OS9 endoplasmic reticulum lectin.
     
 0.667
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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