STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108297314Uncharacterized protein. (164 aa)    
Predicted Functional Partners:
GATAD2A
GATA zinc finger domain containing 2A.
    
 
 0.621
GATAD2B
GATA zinc finger domain containing 2B.
    
 
 0.620
ENSCCAP00000016575
MBD domain-containing protein.
   
 
 0.454
MBD3
Methyl-CpG binding domain protein 3.
   
 
 0.454
MBD2
Methyl-CpG binding domain protein 2.
   
 
 0.454
NYNRIN
NYN domain and retroviral integrase containing.
    
 
 0.405
MTA2
Metastasis associated 1 family member 2.
    
 
 0.400
MTA3
Metastasis associated 1 family member 3.
    
 
 0.400
MTA1
Metastasis associated 1.
    
 
 0.400
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.