STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DSTDystonin. (7407 aa)    
Predicted Functional Partners:
COL17A1
Collagen type XVII alpha 1 chain.
   
 0.936
MACF1
Microtubule actin crosslinking factor 1.
   
   0.928
PLEC
Plectin.
    
 0.920
JUP
Junction plakoglobin.
   
 0.880
ITGB4
Integrin beta.
   
 0.846
MAPRE1
Microtubule associated protein RP/EB family member 1.
    
 
 0.826
ENSCCAP00000036500
Uncharacterized protein.
    
 
 0.826
PKP2
Plakophilin 2.
   
 0.810
PKP1
Plakophilin 1.
   
 0.783
DSP
Desmoplakin.
    
 0.781
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.