Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIM45Tripartite motif containing 45. (580 aa)    
Predicted Functional Partners:
ZNF227
Zinc finger protein 227.
    
 0.741
TAB2
TGF-beta activated kinase 1 (MAP3K7) binding protein 2.
    
 
 0.738
UBE2D1
Ubiquitin conjugating enzyme E2 D1; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.640
STAC
SH3 and cysteine rich domain.
    
 0.624
SORBS1
Sorbin and SH3 domain containing 1.
    
 
 0.615
FCHSD2
FCH and double SH3 domains 2.
      
 0.614
SPART
Spartin.
      
 0.614
TRAT1
T cell receptor associated transmembrane adaptor 1.
      
 0.567
TRIM41
Tripartite motif containing 41.
      
 0.557
KNOP1
Lysine rich nucleolar protein 1.
      
 0.555
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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