STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRC42Leucine rich repeat containing 42. (428 aa)    
Predicted Functional Partners:
TRARG1
Trafficking regulator of GLUT4 (SLC2A4) 1.
      
 0.612
SMIM15
Small integral membrane protein 15.
      
 0.603
TCEANC2
Transcription elongation factor A N-terminal and central domain containing 2.
      
 0.600
DCAF5
DDB1 and CUL4 associated factor 5.
      
 0.598
PPP1R14D
Protein phosphatase 1 regulatory inhibitor subunit 14D.
      
 0.571
EXD2
Exonuclease 3'-5' domain containing 2.
      
 0.557
RIC8B
RIC8 guanine nucleotide exchange factor B.
      
 0.557
LDLRAD1
Low density lipoprotein receptor class A domain containing 1.
      
 0.549
IQCB1
IQ motif containing B1.
      
 0.545
FANCB
FA complementation group B.
      
 0.545
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.