Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRC25Leucine rich repeat containing 25. (355 aa)    
Predicted Functional Partners:
NFAM1
NFAT activating protein with ITAM motif 1.
   
    0.696
DDX58
DExD/H-box helicase 58.
    
 
 0.657
B3GALT6
Hexosyltransferase.
     
 0.635
GAL3ST4
Galactose-3-O-sulfotransferase 4.
      
 0.616
PGPEP1
Pyroglutamyl-peptidase I.
    
 
 0.611
CHST8
Carbohydrate sulfotransferase.
    
 0.567
PHF21A
PHD finger protein 21A.
    
 0.563
C1RL
Complement C1r subcomponent like; Belongs to the peptidase S1 family.
    
 0.556
SLC4A3
Anion exchange protein.
     
 0.534
DDX20
DEAD-box helicase 20.
    
 0.525
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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