STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108287040Histone domain-containing protein; Belongs to the histone H2B family. (127 aa)    
Predicted Functional Partners:
H2AC20
Histone H2A; Belongs to the histone H2A family.
 
 0.827
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.827
H2AC1
Histone H2A; Belongs to the histone H2A family.
 
 0.818
GLYR1
Glyoxylate reductase 1 homolog.
    
   0.804
MACROH2A1
Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes.
   
 0.754
LOC108297774
Uncharacterized protein.
    
 0.741
KDM6A
Lysine demethylase 6A.
    
 0.741
KDM6B
Lysine demethylase 6B.
    
 0.741
ENSCCAP00000025584
Histone H2A; Belongs to the histone H2A family.
 
 0.713
MACROH2A2
Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes.
   
 0.703
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.