Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SYNGR1Synaptogyrin. (234 aa)    
Predicted Functional Partners:
FATE1
Fetal and adult testis expressed 1.
    
   0.728
SYNPR
Synaptoporin.
   
 
 0.687
RAB3A
RAB3A, member RAS oncogene family.
   
 
 0.640
MAK
Male germ cell associated kinase.
   
    0.601
ICK
Intestinal cell kinase.
   
    0.601
SYP
Synaptophysin.
   
 
 0.576
CHRNB3
Cholinergic receptor nicotinic beta 3 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
  
 0.566
MAPK8IP2
Mitogen-activated protein kinase 8 interacting protein 2.
   
  
 0.565
CHRNE
Cholinergic receptor nicotinic epsilon subunit.
   
  
 0.565
DLGAP3
DLG associated protein 3.
      
 0.545
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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