Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SKA1Spindle and kinetochore associated complex subunit 1. (255 aa)    
Predicted Functional Partners:
SKA3
Spindle and kinetochore associated complex subunit 3.
   
 0.993
SKA2
Spindle and kinetochore associated complex subunit 2.
    
 0.991
NDC80
NDC80 kinetochore complex component.
   
 0.986
NUF2
NUF2 component of NDC80 kinetochore complex.
   
 0.976
BUB1
BUB1 mitotic checkpoint serine/threonine kinase.
   
 
 0.948
SPC24
SPC24 component of NDC80 kinetochore complex.
   
 0.940
SPC25
SPC25 component of NDC80 kinetochore complex.
   
 0.939
PLK1
Serine/threonine-protein kinase PLK.
   
 
 0.929
SGO1
Shugoshin 1.
   
 
 0.928
CENPE
Centromere protein E; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.901
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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