STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VSTM4V-set and transmembrane domain containing 4. (320 aa)    
Predicted Functional Partners:
DUSP19
Dual specificity phosphatase 19.
    
 
 0.632
LLGL2
LLGL scribble cell polarity complex component 2.
      
 0.557
CELSR1
Cadherin EGF LAG seven-pass G-type receptor 1; Belongs to the G-protein coupled receptor 2 family.
      
 0.557
C1QTNF6
C1q and TNF related 6.
      
 0.545
TMEM170B
Transmembrane protein 170B.
      
 0.538
NME8
NME/NM23 family member 8.
   
  0.463
WDR90
WD repeat domain 90.
   
 0.452
ACTR5
Actin related protein 5; Belongs to the actin family.
     
 0.430
GPR137C
G protein-coupled receptor 137C.
      
 0.427
NBR1
NBR1 autophagy cargo receptor.
    
 0.426
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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