Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HMGN2High mobility group nucleosomal binding domain 2. (90 aa)    
Predicted Functional Partners:
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.934
LOC108288201
Ubiquitin-like domain-containing protein.
   
 0.934
RPL13
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 0.894
ENSCCAP00000000592
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
  
 0.828
RPL11
Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
  
 0.828
RPLP2
Ribosomal protein lateral stalk subunit P2; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 0.822
ENSCCAP00000037673
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 0.822
LOC108302211
Uncharacterized protein.
  
 0.817
RPL35
Uncharacterized protein.
  
 0.817
TUFM
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 0.782
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.