STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
COL14A1Collagen type XIV alpha 1 chain. (1794 aa)    
Predicted Functional Partners:
DCN
Decorin; May affect the rate of fibrils formation.
   
 0.809
OGN
Osteoglycin.
   
 0.788
COL6A2
Collagen type VI alpha 2 chain.
   
 0.756
COL4A2
Collagen type IV alpha 2 chain.
   
 0.755
COL4A6
Collagen type IV alpha 6 chain.
   
 0.744
PRELP
Proline and arginine rich end leucine rich repeat protein.
   
 0.650
COL4A4
Collagen type IV alpha 4 chain.
   
 
 0.642
ITGA1
Integrin subunit alpha 1; Belongs to the integrin alpha chain family.
   
 0.635
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.589
COL8A2
Collagen type VIII alpha 2 chain.
    
 0.587
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.