Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FOXB1Forkhead box B1. (325 aa)    
Predicted Functional Partners:
PRDM16
PR/SET domain 16.
      
 0.630
ZIC4
Zic family member 4.
   
  
 0.617
SOX5
SRY-box transcription factor 5.
      
 0.579
GRIK2
Glutamate ionotropic receptor kainate type subunit 2.
      
 0.550
LBX1
Ladybird homeobox 1.
   
  
 0.456
SHOX2
Short stature homeobox 2.
   
  
 0.438
SHOX
Short stature homeobox.
   
  
 0.438
CFAP36
Cilia and flagella associated protein 36.
      
 0.417
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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