STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC18A3Solute carrier family 18 member A3. (532 aa)    
Predicted Functional Partners:
CHAT
Choline O-acetyltransferase; Belongs to the carnitine/choline acetyltransferase family.
 
 
 
 0.974
SLC32A1
Solute carrier family 32 member 1.
     
 0.926
SLC17A6
Solute carrier family 17 member 6.
     
 0.912
SLC17A8
Solute carrier family 17 member 8.
     
 0.901
SLC17A7
Solute carrier family 17 member 7.
     
 0.900
SLC18A1
Solute carrier family 18 member A1.
     
  0.840
SLC18A2
Solute carrier family 18 member A2.
     
  0.840
SYT1
Synaptotagmin 1.
     
 0.838
SYT2
Synaptotagmin 2.
     
 0.838
VAMP2
V-SNARE coiled-coil homology domain-containing protein.
   
 
 0.825
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.