STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFCC1EF-hand and coiled-coil domain containing 1. (600 aa)    
Predicted Functional Partners:
PET100
PET100 cytochrome c oxidase chaperone.
      
 0.558
POLD4
Uncharacterized protein.
      
 0.549
ERMN
Ermin.
      
 0.545
TRPC1
Transient receptor potential cation channel subfamily C member 1; Belongs to the transient receptor (TC 1.A.4) family.
      
 0.540
LYPD6
LY6/PLAUR domain containing 6.
      
 0.476
FKBP9
Peptidylprolyl isomerase.
      
 0.465
KCNG2
Potassium voltage-gated channel modifier subfamily G member 2; Belongs to the potassium channel family.
      
 0.459
C1orf198
Chromosome 1 open reading frame 198.
      
 0.439
EFCAB11
EF-hand calcium binding domain 11.
      
 0.417
KCNS1
Potassium voltage-gated channel modifier subfamily S member 1; Belongs to the potassium channel family.
      
 0.417
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.