ENSCCAP00000001993 protein (Cebus capucinus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSCCAP00000001993

Uncharacterized protein. (214 aa)

Predicted Functional Partners:

ERLEC1

0.798

OS9

0.798

SYVN1

0.646

DERL1

0.605

DERL2

0.605

DERL3

0.605

ENSCCAP00000021855

0.605

AMFR

0.564

CHFR

0.547

RNF139

0.547

Your Current Organism:

Cebus capucinus

NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMFR	DERL1	ENSCCAP00000021018	ENSCCAP00000002699	Autocrine motility factor receptor.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.982
AMFR	DERL2	ENSCCAP00000021018	ENSCCAP00000010338	Autocrine motility factor receptor.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.921
AMFR	DERL3	ENSCCAP00000021018	ENSCCAP00000014076	Autocrine motility factor receptor.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.921
AMFR	ENSCCAP00000001993	ENSCCAP00000021018	ENSCCAP00000001993	Autocrine motility factor receptor.	Uncharacterized protein.	0.564
AMFR	ENSCCAP00000021855	ENSCCAP00000021018	ENSCCAP00000021855	Autocrine motility factor receptor.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.921
AMFR	ERLEC1	ENSCCAP00000021018	ENSCCAP00000005361	Autocrine motility factor receptor.	Endoplasmic reticulum lectin 1.	0.934
AMFR	OS9	ENSCCAP00000021018	ENSCCAP00000026652	Autocrine motility factor receptor.	OS9 endoplasmic reticulum lectin.	0.937
AMFR	RNF139	ENSCCAP00000021018	ENSCCAP00000029612	Autocrine motility factor receptor.	Ring finger protein 139.	0.499
AMFR	SYVN1	ENSCCAP00000021018	ENSCCAP00000040296	Autocrine motility factor receptor.	Synoviolin 1.	0.544
CHFR	DERL1	ENSCCAP00000012971	ENSCCAP00000002699	Checkpoint with forkhead and ring finger domains.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.712
CHFR	DERL2	ENSCCAP00000012971	ENSCCAP00000010338	Checkpoint with forkhead and ring finger domains.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.712
CHFR	DERL3	ENSCCAP00000012971	ENSCCAP00000014076	Checkpoint with forkhead and ring finger domains.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.712
CHFR	ENSCCAP00000001993	ENSCCAP00000012971	ENSCCAP00000001993	Checkpoint with forkhead and ring finger domains.	Uncharacterized protein.	0.547
CHFR	ENSCCAP00000021855	ENSCCAP00000012971	ENSCCAP00000021855	Checkpoint with forkhead and ring finger domains.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.712
CHFR	ERLEC1	ENSCCAP00000012971	ENSCCAP00000005361	Checkpoint with forkhead and ring finger domains.	Endoplasmic reticulum lectin 1.	0.816
CHFR	OS9	ENSCCAP00000012971	ENSCCAP00000026652	Checkpoint with forkhead and ring finger domains.	OS9 endoplasmic reticulum lectin.	0.816
DERL1	AMFR	ENSCCAP00000002699	ENSCCAP00000021018	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	Autocrine motility factor receptor.	0.982
DERL1	CHFR	ENSCCAP00000002699	ENSCCAP00000012971	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	Checkpoint with forkhead and ring finger domains.	0.712
DERL1	DERL2	ENSCCAP00000002699	ENSCCAP00000010338	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.969
DERL1	DERL3	ENSCCAP00000002699	ENSCCAP00000014076	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.985