STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBI1ORC ubiquitin ligase 1. (783 aa)    
Predicted Functional Partners:
CLDN14
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
      
 0.638
RIMKLA
Ribosomal modification protein rimK like family member A.
      
 0.638
FKBP5
Peptidylprolyl isomerase.
      
 0.638
CNOT10
CCR4-NOT transcription complex subunit 10.
    
 
 0.556
CNOT11
CCR4-NOT transcription complex subunit 11.
    
 
 0.549
NRN1
Neuritin 1.
      
 0.519
SLC25A20
Solute carrier family 25 member 20; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.501
USP49
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
      
 0.485
SCEL
Sciellin.
      
 0.471
ENSCCAP00000006462
Uncharacterized protein.
   
 
 0.408
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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