STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK2Sidekick cell adhesion molecule 2. (2118 aa)    
Predicted Functional Partners:
COL27A1
Collagen type XXVII alpha 1 chain.
   
 0.659
SLC35F1
Solute carrier family 35 member F1.
      
 0.590
NTNG1
Netrin G1.
    
 0.589
MEGF11
Multiple EGF like domains 11.
    
 
 0.587
BICC1
BicC family RNA binding protein 1.
      
 0.561
IGSF21
Immunoglobin superfamily member 21.
    
 0.551
ITGB8
Integrin beta; Belongs to the integrin beta chain family.
    
 0.528
ZNF516
Zinc finger protein 516.
     
 0.510
SLC17A8
Solute carrier family 17 member 8.
      
 0.501
MRE11
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
 0.497
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.