Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
COL17A1Collagen type XVII alpha 1 chain. (1412 aa)    
Predicted Functional Partners:
DST
Dystonin.
   
 0.936
ITGB4
Integrin beta.
   
 0.935
MACF1
Microtubule actin crosslinking factor 1.
   
 0.755
PLEC
Plectin.
   
 0.733
LAMA3
Laminin subunit alpha 3.
   
 0.727
LAMB3
Laminin subunit beta 3.
   
 0.722
LAMC2
Laminin subunit gamma 2.
   
 0.696
XPR1
Xenotropic and polytropic retrovirus receptor 1.
      
 0.676
AMTN
Amelotin.
      
 0.672
MMP20
Matrix metallopeptidase 20.
   
 0.668
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.