Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM49AFamily with sequence similarity 49 member A. (323 aa)    
Predicted Functional Partners:
FAM49B
Family with sequence similarity 49 member B.
   
  0.996
RAC3
Rac family small GTPase 3.
    
 0.863
DDX1
DEAD-box helicase 1.
      
 0.787
RAC2
Rac family small GTPase 2.
    
 0.748
RAC1
Rac family small GTPase 1.
    
 0.687
ENSCCAP00000004537
Uncharacterized protein.
    
 0.687
MYCN
MYCN proto-oncogene, bHLH transcription factor.
      
 0.616
LACTBL1
Lactamase beta like 1.
      
 0.558
ZBTB44
Zinc finger and BTB domain containing 44.
      
 0.558
SPATS2L
Spermatogenesis associated serine rich 2 like.
      
 0.548
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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