STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VCLVinculin. (1134 aa)    
Predicted Functional Partners:
TLN1
Talin 1.
   
 0.998
TLN2
Talin 2.
   
 0.998
PXN
Paxillin.
   
 0.995
ACTN4
Actinin alpha 4.
   
 0.991
ACTN1
Actinin alpha 1.
   
 0.982
CTNNA3
Catenin alpha 3.
    
0.979
LOC108293227
Uncharacterized protein.
    
0.978
CTNNA1
Catenin alpha 1.
    
0.978
CTNNA2
Catenin alpha 2.
    
0.978
TLNRD1
Talin rod domain containing 1.
   
 0.964
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.