STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IBA57Iron-sulfur cluster assembly factor IBA57. (357 aa)    
Predicted Functional Partners:
AMT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
     
 0.848
ISCA2
Fe-S_biosyn domain-containing protein.
  
 
 0.818
ENSCCAP00000013607
SHMT domain-containing protein.
     
 0.790
SHMT1
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
     
 0.790
SHMT2
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
     
 0.790
GLDC
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
     
 0.784
LOC108314003
DHFR domain-containing protein.
   
 
 0.768
DHFR
DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.
   
 
 0.768
ENSCCAP00000016714
DHFR domain-containing protein.
   
 
 0.768
PDPR
Pyruvate dehydrogenase phosphatase regulatory subunit.
     
 0.768
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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