STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRTM1Leucine rich repeat transmembrane neuronal 1. (522 aa)    
Predicted Functional Partners:
CLSTN3
Calsyntenin 3.
   
  
 0.783
RAB12
RAB12, member RAS oncogene family.
    
  0.697
NRXN2
Neurexin 2.
   
 0.694
KCNS3
Potassium voltage-gated channel modifier subfamily S member 3; Belongs to the potassium channel family.
   
 
 0.662
NRXN1
Neurexin 1.
   
 0.655
LOC108287484
LAM_G_DOMAIN domain-containing protein.
   
 0.652
NRXN3
Neurexin 3.
   
 0.652
CTNNA2
Catenin alpha 2.
   
 0.621
NXPH1
Neurexophilin; May be signaling molecules that resemble neuropeptides.
   
  
 0.618
TRAPPC10
Uncharacterized protein.
      
 0.612
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.