STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TNIP1Uncharacterized protein. (660 aa)    
Predicted Functional Partners:
TNFAIP3
TNF alpha induced protein 3.
   
 0.965
IKBKG
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
   
 0.917
NFKB1
Nuclear factor kappa B subunit 1.
   
 
 0.880
OPTN
Optineurin.
   
 0.849
TNF
Tumor necrosis factor; Belongs to the tumor necrosis factor family.
    
 
 0.840
TNFRSF1A
TNF receptor superfamily member 1A.
    
 
 0.827
MAP1LC3A
Microtubule associated protein 1 light chain 3 alpha.
    
   0.767
TBK1
TANK binding kinase 1.
   
 
 0.750
NFKB2
Nuclear factor kappa B subunit 2.
   
 
 0.723
TAX1BP1
Tax1 binding protein 1.
    
 
 0.713
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.