Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
POU3F1POU domain protein. (451 aa)    
Predicted Functional Partners:
ZNF521
Zinc finger protein 521.
    
 0.585
SOX3
SRY-box transcription factor 3.
   
 0.557
SOX21
SRY-box transcription factor 21.
  
 0.542
NPAS3
Neuronal PAS domain protein 3.
   
 0.539
NPAS1
Neuronal PAS domain protein 1.
    
 0.536
POU4F2
POU domain protein.
   
 
 0.518
POU4F1
POU domain protein.
   
 
 0.518
POU4F3
POU domain protein.
   
 
 0.518
C11orf53
Chromosome 11 open reading frame 53.
    
 
 0.509
MNX1
Motor neuron and pancreas homeobox 1.
  
 
 
 0.503
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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