STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTS18ADAM metallopeptidase with thrombospondin type 1 motif 18. (1221 aa)    
Predicted Functional Partners:
TET2
Tet methylcytosine dioxygenase 2.
      
 0.861
GPR84
G protein-coupled receptor 84.
      
 0.834
USH1C
USH1 protein network component harmonin.
      
 0.830
SCUBE2
Signal peptide, CUB domain and EGF like domain containing 2.
   
 0.829
ARID4B
AT-rich interaction domain 4B.
      
 0.828
IRX3
Iroquois homeobox 3.
   
  
 0.815
HIVEP3
Human immunodeficiency virus type I enhancer binding protein 3.
      
 0.801
SALL4
Uncharacterized protein.
   
  
 0.790
DIAPH2
Diaphanous related formin 2.
      
 0.787
B3GLCT
Beta 3-glucosyltransferase.
    
 0.778
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.