Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PATE3Prostate and testis expressed 3. (98 aa)    
Predicted Functional Partners:
PATE1
Prostate and testis expressed 1.
   
 
 0.980
PATE2
Prostate and testis expressed 2.
  
  
 0.958
PATE4
Prostate and testis expressed 4.
     
 0.923
LYPD6B
LY6/PLAUR domain containing 6B.
     
 0.866
LYPD6
LY6/PLAUR domain containing 6.
     
 0.865
LYNX1
Ly6/neurotoxin 1.
     
 0.865
SLURP1
Secreted LY6/PLAUR domain containing 1.
     
 0.865
CHRNG
Cholinergic receptor nicotinic gamma subunit.
     
  0.840
CHRNA7
Uncharacterized protein.
     
 0.840
CHRNA9
Cholinergic receptor nicotinic alpha 9 subunit.
     
  0.840
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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