ENSCCAP00000006830 protein (Cebus capucinus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSCCAP00000006830

Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (170 aa)

Predicted Functional Partners:

FAU

0.994

LOC108288201

0.994

LOC108294668

0.993

RPS29

0.993

RPS9

0.990

ENSCCAP00000032906

0.990

LOC108297999

0.989

RPS21

0.989

EEF2

0.986

RPL13

0.985

Your Current Organism:

Cebus capucinus

NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EEF2	ENSCCAP00000006830	ENSCCAP00000033139	ENSCCAP00000006830	Eukaryotic translation elongation factor 2.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.986
EEF2	ENSCCAP00000032906	ENSCCAP00000033139	ENSCCAP00000032906	Eukaryotic translation elongation factor 2.	Ribosomal_S4 domain-containing protein.	0.971
EEF2	FAU	ENSCCAP00000033139	ENSCCAP00000027375	Eukaryotic translation elongation factor 2.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.980
EEF2	LOC108288201	ENSCCAP00000033139	ENSCCAP00000039238	Eukaryotic translation elongation factor 2.	Ubiquitin-like domain-containing protein.	0.980
EEF2	LOC108294668	ENSCCAP00000033139	ENSCCAP00000027312	Eukaryotic translation elongation factor 2.	Uncharacterized protein.	0.973
EEF2	LOC108297999	ENSCCAP00000033139	ENSCCAP00000009415	Eukaryotic translation elongation factor 2.	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.	0.958
EEF2	RPL13	ENSCCAP00000033139	ENSCCAP00000012941	Eukaryotic translation elongation factor 2.	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	0.984
EEF2	RPS21	ENSCCAP00000033139	ENSCCAP00000037700	Eukaryotic translation elongation factor 2.	Ribosomal protein S21.	0.958
EEF2	RPS29	ENSCCAP00000033139	ENSCCAP00000040569	Eukaryotic translation elongation factor 2.	Ribosomal protein S29.	0.867
EEF2	RPS9	ENSCCAP00000033139	ENSCCAP00000001200	Eukaryotic translation elongation factor 2.	S4 RNA-binding domain-containing protein.	0.971
ENSCCAP00000006830	EEF2	ENSCCAP00000006830	ENSCCAP00000033139	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Eukaryotic translation elongation factor 2.	0.986
ENSCCAP00000006830	ENSCCAP00000032906	ENSCCAP00000006830	ENSCCAP00000032906	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Ribosomal_S4 domain-containing protein.	0.990
ENSCCAP00000006830	FAU	ENSCCAP00000006830	ENSCCAP00000027375	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.994
ENSCCAP00000006830	LOC108288201	ENSCCAP00000006830	ENSCCAP00000039238	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Ubiquitin-like domain-containing protein.	0.994
ENSCCAP00000006830	LOC108294668	ENSCCAP00000006830	ENSCCAP00000027312	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.993
ENSCCAP00000006830	LOC108297999	ENSCCAP00000006830	ENSCCAP00000009415	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.	0.989
ENSCCAP00000006830	RPL13	ENSCCAP00000006830	ENSCCAP00000012941	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	0.985
ENSCCAP00000006830	RPS21	ENSCCAP00000006830	ENSCCAP00000037700	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Ribosomal protein S21.	0.989
ENSCCAP00000006830	RPS29	ENSCCAP00000006830	ENSCCAP00000040569	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Ribosomal protein S29.	0.993
ENSCCAP00000006830	RPS9	ENSCCAP00000006830	ENSCCAP00000001200	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	S4 RNA-binding domain-containing protein.	0.990