STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC14BLeucine rich repeat containing 14B. (514 aa)    
Predicted Functional Partners:
PIK3IP1
Phosphoinositide-3-kinase interacting protein 1.
      
 0.511
ASB12
Ankyrin repeat and SOCS box containing 12.
   
  
 0.508
LRRC20
Leucine rich repeat containing 20.
      
 0.507
LRRC30
Leucine rich repeat containing 30.
   
  
 0.473
TMEM38A
Transmembrane protein 38A.
   
  
 0.456
TMEM236
Transmembrane protein 236.
      
 0.404
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.