Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATXN2 | EIF4G1 | ENSCCAP00000017163 | ENSCCAP00000038938 | Ataxin 2. | Eukaryotic translation initiation factor 4 gamma 1. | 0.706 |
ATXN2 | LOC108295278 | ENSCCAP00000017163 | ENSCCAP00000019315 | Ataxin 2. | Uncharacterized protein. | 0.792 |
ATXN2 | NCBP2 | ENSCCAP00000017163 | ENSCCAP00000014529 | Ataxin 2. | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] | 0.593 |
EIF4G1 | ATXN2 | ENSCCAP00000038938 | ENSCCAP00000017163 | Eukaryotic translation initiation factor 4 gamma 1. | Ataxin 2. | 0.706 |
EIF4G1 | LOC108295278 | ENSCCAP00000038938 | ENSCCAP00000019315 | Eukaryotic translation initiation factor 4 gamma 1. | Uncharacterized protein. | 0.834 |
EIF4G1 | LOC108296990 | ENSCCAP00000038938 | ENSCCAP00000001426 | Eukaryotic translation initiation factor 4 gamma 1. | MIF4G domain-containing protein. | 0.562 |
EIF4G1 | NCBP2 | ENSCCAP00000038938 | ENSCCAP00000014529 | Eukaryotic translation initiation factor 4 gamma 1. | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] | 0.832 |
EIF4G1 | PAIP1 | ENSCCAP00000038938 | ENSCCAP00000022303 | Eukaryotic translation initiation factor 4 gamma 1. | MIF4G domain-containing protein. | 0.562 |
EIF4G1 | UPF1 | ENSCCAP00000038938 | ENSCCAP00000028528 | Eukaryotic translation initiation factor 4 gamma 1. | UPF1 RNA helicase and ATPase. | 0.766 |
LARP4B | LOC108295278 | ENSCCAP00000014154 | ENSCCAP00000019315 | La ribonucleoprotein domain family member 4B. | Uncharacterized protein. | 0.715 |
LOC108295278 | ATXN2 | ENSCCAP00000019315 | ENSCCAP00000017163 | Uncharacterized protein. | Ataxin 2. | 0.792 |
LOC108295278 | EIF4G1 | ENSCCAP00000019315 | ENSCCAP00000038938 | Uncharacterized protein. | Eukaryotic translation initiation factor 4 gamma 1. | 0.834 |
LOC108295278 | LARP4B | ENSCCAP00000019315 | ENSCCAP00000014154 | Uncharacterized protein. | La ribonucleoprotein domain family member 4B. | 0.715 |
LOC108295278 | LOC108296990 | ENSCCAP00000019315 | ENSCCAP00000001426 | Uncharacterized protein. | MIF4G domain-containing protein. | 0.920 |
LOC108295278 | NCBP2 | ENSCCAP00000019315 | ENSCCAP00000014529 | Uncharacterized protein. | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] | 0.753 |
LOC108295278 | PAIP1 | ENSCCAP00000019315 | ENSCCAP00000022303 | Uncharacterized protein. | MIF4G domain-containing protein. | 0.920 |
LOC108295278 | PAN2 | ENSCCAP00000019315 | ENSCCAP00000037599 | Uncharacterized protein. | PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...] | 0.787 |
LOC108295278 | PAN3 | ENSCCAP00000019315 | ENSCCAP00000007021 | Uncharacterized protein. | PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] | 0.793 |
LOC108295278 | SMG1 | ENSCCAP00000019315 | ENSCCAP00000012673 | Uncharacterized protein. | SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family. | 0.766 |
LOC108295278 | UPF1 | ENSCCAP00000019315 | ENSCCAP00000028528 | Uncharacterized protein. | UPF1 RNA helicase and ATPase. | 0.750 |
page 1 of 3