Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CCK | EDN1 | ENSCCAP00000008558 | ENSCCAP00000005187 | Cholecystokinin. | Endothelin 1. | 0.417 |
CCK | GAL | ENSCCAP00000008558 | ENSCCAP00000021998 | Cholecystokinin. | Galanin and GMAP prepropeptide. | 0.697 |
CCK | GAST | ENSCCAP00000008558 | ENSCCAP00000013973 | Cholecystokinin. | Gastrin. | 0.732 |
CCK | NTS | ENSCCAP00000008558 | ENSCCAP00000020223 | Cholecystokinin. | Neurotensin. | 0.861 |
CCK | QRFPR | ENSCCAP00000008558 | ENSCCAP00000019844 | Cholecystokinin. | Pyroglutamylated RFamide peptide receptor; Belongs to the G-protein coupled receptor 1 family. | 0.898 |
EDN1 | CCK | ENSCCAP00000005187 | ENSCCAP00000008558 | Endothelin 1. | Cholecystokinin. | 0.417 |
EDN1 | EDN3 | ENSCCAP00000005187 | ENSCCAP00000022535 | Endothelin 1. | Endothelin 3. | 0.959 |
EDN1 | GNA11 | ENSCCAP00000005187 | ENSCCAP00000009973 | Endothelin 1. | G protein subunit alpha 11. | 0.444 |
EDN1 | GNA14 | ENSCCAP00000005187 | ENSCCAP00000010270 | Endothelin 1. | G protein subunit alpha 14. | 0.444 |
EDN1 | GNA15 | ENSCCAP00000005187 | ENSCCAP00000021320 | Endothelin 1. | G protein subunit alpha 15. | 0.453 |
EDN1 | GNAQ | ENSCCAP00000005187 | ENSCCAP00000022382 | Endothelin 1. | G protein subunit alpha q. | 0.444 |
EDN1 | NTS | ENSCCAP00000005187 | ENSCCAP00000020223 | Endothelin 1. | Neurotensin. | 0.520 |
EDN1 | QRFPR | ENSCCAP00000005187 | ENSCCAP00000019844 | Endothelin 1. | Pyroglutamylated RFamide peptide receptor; Belongs to the G-protein coupled receptor 1 family. | 0.501 |
EDN3 | EDN1 | ENSCCAP00000022535 | ENSCCAP00000005187 | Endothelin 3. | Endothelin 1. | 0.959 |
EDN3 | GNA15 | ENSCCAP00000022535 | ENSCCAP00000021320 | Endothelin 3. | G protein subunit alpha 15. | 0.418 |
EDN3 | QRFPR | ENSCCAP00000022535 | ENSCCAP00000019844 | Endothelin 3. | Pyroglutamylated RFamide peptide receptor; Belongs to the G-protein coupled receptor 1 family. | 0.503 |
GAL | CCK | ENSCCAP00000021998 | ENSCCAP00000008558 | Galanin and GMAP prepropeptide. | Cholecystokinin. | 0.697 |
GAL | NTS | ENSCCAP00000021998 | ENSCCAP00000020223 | Galanin and GMAP prepropeptide. | Neurotensin. | 0.771 |
GAL | QRFPR | ENSCCAP00000021998 | ENSCCAP00000019844 | Galanin and GMAP prepropeptide. | Pyroglutamylated RFamide peptide receptor; Belongs to the G-protein coupled receptor 1 family. | 0.483 |
GAST | CCK | ENSCCAP00000013973 | ENSCCAP00000008558 | Gastrin. | Cholecystokinin. | 0.732 |
page 1 of 4